A ) UMAP of single-cell RNA sequencing of CSF-derived cells which contain CD4 and CD8 T-cells, myeloid cells, NK cells, and B-cells.
B ) Proportions of each CSF sample. View code for A,B and D
C ) Congruence analysis using SingleR of the predicted cell-type within each cluster using the Cantoni et al.2024 single cell reference atlas View code
D ) Top gene expression markers for each cell type. Check it closer!